cellxgene-census
cellxgene-census (K-Dense-AI/scientific-agent-skills): Queries the CZ CELLxGENE Census programmatically for versioned public single-cell and spatial transcriptomics data. Use when you need population-scale cell metadata, gene expression slices, Census summary counts, source H5AD URIs/downloads, embeddings, spatial Census data, or reference atlas comparisons across organisms, tissues, diseases, assays, and cell types. For analyzing your own local single-cell data use scanpy, anndata, or scvi-tools.
Stars
52k
Votes
—
Score
47.2009
Source: K-Dense-AI/scientific-agent-skills · skills/cellxgene-census/SKILL.md
npx skills add K-Dense-AI/scientific-agent-skills --skill cellxgene-census
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