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cellprofiler

cellprofiler (K-Dense-AI/scientific-agent-skills): Runs reproducible CellProfiler microscopy pipelines for nuclear segmentation, cell counts, and per-object fluorescence measurements. Supports image/channel manifests, headless batch execution, segmentation overlays, and measurement QC for 2D fluorescence assays.

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Source: K-Dense-AI/scientific-agent-skills · skills/cellprofiler/SKILL.md

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npx skills add K-Dense-AI/scientific-agent-skills --skill cellprofiler

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