alphagenome
alphagenome (K-Dense-AI/scientific-agent-skills): Looks up precomputed AlphaGenome Atlas effects for any GRCh38 single-nucleotide variant (AVI score with Phred and 18 SHAP feature attributions, plus raw and quantile scores for RNA-seq, DNase, ATAC, ChIP-TF, ChIP-histone, CAGE, PRO-cap, splicing, polyadenylation and contact-map tracks), scores variants or scans windows on demand with the AlphaGenome model for human and mouse (variant scoring, in silico mutagenesis, REF-versus-ALT track prediction), and builds Atlas website deep links. Use when t
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52k
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47.2009
Source: K-Dense-AI/scientific-agent-skills · skills/alphagenome/SKILL.md
npx skills add K-Dense-AI/scientific-agent-skills --skill alphagenome
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